Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872327.1_cds_XP_016434739.1_30765
CDS Infomation

[gene=LOC107761086] [db_xref=GeneID:107761086] [protein=pto-interacting protein 1-like] [protein_id=XP_016434739.1] [location=join(110683..111268,111694..111951,112047..112219,112592..112671,112785..112932,113378..113725)] [gbkey=CDS]
Sequence

ATGGGGTATTCCCCAAGTAGTTGTACTGACTCTTTGGAGGAGCGTTTTCACAACCCACAC
TCCTCAAAGACTCAAAATTTAGCCATTAAAACTAATCACTATGAGCTAAAGATTAAATCT
TTAATCTACAAAATGATTTGGGATTTCGGATTAGCCTGTATTATCCCACCTCGTAGACGT
CGAAATTCTGTAATCAAGAATCAGTGCAAAAATAAAGATTACGAAAATGGCAAAAATTTG
GAGCATAACAAAGCTTGGTTACTTGCAGAGGCTGGAGGGTGTGGTGGTCCAGAGTTGATT
AATGCGGACCCGCATTCTGTTCACTCTTCTTTTAGGTTCAATTTATGTACTCAAGTTGAG
CTTGATGAGTCAATGAAGTTGGAAAATAGCTGTTCTTCTTCTTCTGCTACTACTACTGTG
TTAATGGTGAATTTGGATAATGGGTTTACTGATCTTAATAAATCTGATCAAGAGCTGAAA
TTTAGGAAAGTTGAGTCTTTAGAGAGGAATATTTCTCCTGTGGTTCATTCCTTGATTAGG
TTCAGCTTTAATGAGATTGCTTCTGCCACTAAAAATTTTTCCAAAGGAAGAGTTTTGGGA
AGAGGAGCATTGAGCTATGTATTCAGAGGAAGAGTGGGATTTTTGAGGACAACAGTGGCA
ATTAAGAGGTTAGATATGGAGGACAAGGAGTCTCCAAAGGCATTTTGTAGGGAATTGATG
ATTGCTAGTTCTCTTCATAACCAATACATTGTTCCTCTTGTGGGTTTTTGCATTGATCCA
GAGGAGGGTTTATTTTTGGTGTACAAGTATGTATCTGGTGGAAGTTTAGAGCGGTATTTG
CATGGAAAGAAGAGGGGAGTTAAAGGTGGTCCAGCACTTACATGGTCTGCTAGGTATAAG
GTGGCTGTAGGAATTGCAGAGTCAATTGGGTATTTGCATAATGGGACTGAGAGATGTGTT
GTTCACAGAGACATCAAGCCCTCAAACATTCTTCTTTCATCAAAGAAAACTCCCAAGTTG
TGTGACTTTGGCTTAGCTACATGGACTCCTGCACCTTCGGTACATTTCCTTTGTAAAACT
GTAAAAGGAACATTTGGGTACTTAGCCCCAGAGTATTTTCAGCACGGTAAAGTGTCTGAT
AAAACCGATGTTTATGCTTTTGGAGTTGTCCTCTTGGAGCTATTAACGGGACGGAAGCCA
ATTGAAGCGAAAAGAGGGCCAGGAGAAGAAAACTTGGTTTTGTGGGCAAAGCCACTATTG
CAGCAAGATGTTCTTGAAAAATTTCTTGATCCAAGACTTAAATTTCCTCGAAAGAATGTA
CACCAAATATCTCGGATGGTTCAAGCAGCAACTGCATGTATACACACTGAAGAATCTCGA
AGGCCCGATATTGATGAGATCATCGACATATTGAGAGGCAGAGAACCTGATTCGTTCAGG
CGGAAGAATACCATTTTACCAAGTAACAGCTGTGTGATTGACTCCCAATTGCAGCAGACT
AGAAACGAAATGAAGAGTCATTTAGCCTTGGCGATGCTAGGAGTTGCAGATTTTGAGGAT
GATGACCTTTATTTCGTTGAAACAAGAAGTTGA

Peptide Sequence

PEP ID

XP_016434739.1
PEP Infomation

PREDICTED: pto-interacting protein 1-like [Nicotiana tabacum]
Sequence

MGYSPSSCTDSLEERFHNPHSSKTQNLAIKTNHYELKIKSLIYKMIWDFGLACIIPPRRR
RNSVIKNQCKNKDYENGKNLEHNKAWLLAEAGGCGGPELINADPHSVHSSFRFNLCTQVE
LDESMKLENSCSSSSATTTVLMVNLDNGFTDLNKSDQELKFRKVESLERNISPVVHSLIR
FSFNEIASATKNFSKGRVLGRGALSYVFRGRVGFLRTTVAIKRLDMEDKESPKAFCRELM
IASSLHNQYIVPLVGFCIDPEEGLFLVYKYVSGGSLERYLHGKKRGVKGGPALTWSARYK
VAVGIAESIGYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTPAPSVHFLCKT
VKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEAKRGPGEENLVLWAKPLL
QQDVLEKFLDPRLKFPRKNVHQISRMVQAATACIHTEESRRPDIDEIIDILRGREPDSFR
RKNTILPSNSCVIDSQLQQTRNEMKSHLALAMLGVADFEDDDLYFVETRS

Transcript Sequence

Gene sequence data has not been registered.